PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000134.1_g00057.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 215aa    MW: 23706 Da    PI: 4.276
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000134.1_g00057.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-182172156
                      AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                             ++y+GVr +k +g+Wv+e+r p++   r r++lg+f+++e+Aa+a +aa  +l+ge
  Itr_sc000134.1_g00057.1 21 CKYRGVRKRK-WGKWVSEVRLPNS---RERIWLGSFDSPEKAARAFDAALFCLRGE 72
                             79*****999.*******999833...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.9E-122172IPR001471AP2/ERF domain
CDDcd000186.85E-302181No hitNo description
PROSITE profilePS5103222.012279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-292280IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-202280IPR016177DNA-binding domain
SMARTSM003805.4E-322285IPR001471AP2/ERF domain
PRINTSPR003677.3E-102334IPR001471AP2/ERF domain
PRINTSPR003677.3E-104561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MVKPKRQTAE IKNEPDSSLS CKYRGVRKRK WGKWVSEVRL PNSRERIWLG SFDSPEKAAR  60
AFDAALFCLR GESANFNFPD NPPDIVNGRS LTREQIQIAA VRFANSAAPI SNSGSGRPEN  120
SDSSSLLNAD APSPPSPSDG SGSVQTCSEM TETSLDSDFL DLCSYIGMED NVANFGIFPG  180
FDDFSGEYYY VSPDIDDVAE NYDGFSSQDS FLWSF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093871.14e-75PREDICTED: ethylene-responsive transcription factor ERF017-like
SwissprotQ84QC21e-59ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLW6FFV75e-69W6FFV7_9R
STRINGGLYMA17G05240.12e-66(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-60ERF family protein